Enzo Primary References¶
The Enzo method paper is not yet complete. However, there are several papers that describe the numerical methods used in Enzo, and this documentation contains a brief outline of the essential physics in Enzo, in Enzo Algorithms. These papers should be considered suitable for citations for Enzo in general:
- Simulating X-Ray Clusters with Adaptive Mesh Refinement by Bryan and Norman. In “Computational Astrophysics; 12th Kingston Meeting on Theoretical Astrophysics;” proceedings of meeting held in Halifax; Nova Scotia; Canada October 17-19; 1996, ASP Conference Series #123, edited by D. A. Clarke and M. J. West., p. 363. Bibtex entry
- A Hybrid AMR Application for Cosmology and Astrophysics by Bryan and Norman. In “Workshop on Structured Adaptive Mesh Refinement Grid Methods”, Mar. 1997, ed. N. Chrisochoides. Bibtex entry
- Cosmological Adaptive Mesh Refinement by Norman and Bryan. In “Numerical Astrophysics : Proceedings of the International Conference on Numerical Astrophysics 1998 (NAP98),” held at the National Olympic Memorial Youth Center, Tokyo, Japan, March 10-13, 1998. Edited by Shoken M. Miyama, Kohji Tomisaka, and Tomoyuki Hanawa. Boston, Mass. : Kluwer Academic, 1999. (Astrophysics and space science library ; v. 240), p.19 Bibtex entry
- Introducing Enzo, an AMR Cosmology Application by O’Shea et al. In “Adaptive Mesh Refinement - Theory and Applications,” Eds. T. Plewa, T. Linde & V. G. Weirs, Springer Lecture Notes in Computational Science and Engineering, 2004. Bibtex entry
- Simulating Cosmological Evolution with Enzo by Norman et al. In “Petascale Computing: Algorithms and Applications,” Ed. D. Bader, CRC Press LLC, 2007. Bibtex entry
The primary hydrodynamics methods are PPM and ZEUS, as described in the following two papers:
- The Piecewise Parabolic Method (PPM) for Gas-Dynamical Simulations by Colella, P.; Woodward, Paul R. Journal of Computational Physics (ISSN 0021-9991), vol. 54, April 1984, p. 174-201. Bibtex entry
- ZEUS-2D: A radiation magnetohydrodynamics code for astrophysical flows in two space dimensions. I - The hydrodynamic algorithms and tests. by Stone and Norman, Astrophysical Journal Supplement Series (ISSN 0067-0049), vol. 80, no. 2, June 1992, p. 753-790. Bibtex Entry
The extension of PPM to cosmology can be found here:
- A piecewise parabolic method for cosmological hydrodynamics. by Bryan et al. Comput. Phys. Commun., Vol. 89, No. 1 - 3, p. 149 - 168 Bibtex entry
The AMR method used in Enzo can be found here:
- Local adaptive mesh refinement for shock hydrodynamics by Berger, M. J. and Colella, P. Journal of Computational Physics (ISSN 0021-9991), vol. 82, May 1989, p. 64-84. Bibtex Entry.
The paper describing the Dedner MHD can be found here:
- Magnetohydrodynamic Simulations of Disk Galaxy Formation: The Magnetization of the Cold and Warm Medium, by Wang, P.; Abel, T. The Astrophysical Journal, Volume 696, Issue 1, pp. 96-109 (2009) Bibtex Entry.
The paper describing the ray-tracing algorithm (MORAY) can be found here:
- ENZO+MORAY: radiation hydrodynamics adaptive mesh refinement simulations with adaptive ray tracing, Wise, J.; Abel, T. Monthly Notices of the Royal Astronomical Society, Volume 414, Issue 4, pp. 3458-3491. Bibtex Entry.
The YT paper can be found here:
- yt: A Multi-code Analysis Toolkit for Astrophysical Simulation Data, by Turk, M. J.; Smith, B. D.; Oishi, J. S.; Skory, S.; Skillman, S. W.; Abel, T.; and Norman, M. L. The Astrophysical Journal Supplement, Volume 192, Issue 1, article id. 9 (2011) Bibtex Entry.